Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891008.1_cds_XP_016445709.1_40644
CDS Infomation

[gene=LOC107770893] [db_xref=GeneID:107770893] [protein=naringenin,2-oxoglutarate 3-dioxygenase] [protein_id=XP_016445709.1] [location=join(45270..45638,46091..46519,46610..46921)] [gbkey=CDS]
Sequence

ATGGCACCTTCGACATTGACAGCTCTAGCAGAGGAAAAGACACTTCAAACAAGTTTCATA
AGGGATGAAGATGAGCGTCCAAAAGTGGCTTATAATCAATTCAGTGACGAGATTCCGATC
ATATCGTTGAAGGGTATTGATGATGAGAGTGGAATTAATGGAAAAAGAGGTGAAATATGT
GAAAAGATTGTTAAGGCATGTGAAGATTGGGGCATTTTCCAGGTAGTTGATCATGGTGTT
GATGCCCAACTTATCTCACAAATGACAACCCTTGCTAAACAATTCTTCGCTTTGCCTCCT
GAGGAAAAACTACGCTTTGATATGTCTGGTGGCAAGAAAGGTGGCTTCATTGTCTCTAGC
CATCTACAGGGTGAAGTGGTCCAAGATTGGCGTGAAATAGTGACCTATTTCTCATATCCA
ATTCGGGCTAGAGACTACTCTAGATGGCCAGACAAACCAGATGGATGGATAGGTGTGACT
CAGAAGTACAGTGAAAAGTTAATGGAGTTGGCTTGCAAATTATTGGAAGTACTATCAGAG
GCAATGGGCTTAGAGAAGGAGGCCTTAACCAAGGCATGTGTGGATATGGACCAAAAAGTG
GTTGTCAATTTTTACCCAAAGTGTCCACAGCCCGACCTTACCCTTGGACTGAAACGACAC
ACTGATCCAGGAACCATTACCCTCTTGTTACAAGACCAAGTTGGTGGGCTTCAAGCCACT
AAAGATAATGGCAAAACTTGGATTACTGTTCAGCCCGTTGAAGGCGCTTTTGTTGTCAAT
CTTGGTGACCATGGTCACTTTTTGAGCAATGGAAGGTTTAAGAATGCTGATCATCAAGCA
GTGGTGAACTCGAATAGTAGCAGATTATCGATAGCTACGTTTCAGAATCCAGCACCAGAA
GCTATAGTGTACCCATTGAAAATTAGGGAAGGAGAGAAGGCAGTAATGGACGAGCCCATA
ACATTTGCAGAGATGTACAGGAGGAAAATGAGCAAGGACCTTGAGCTTGCTAGGCTCAAG
AAACTGGCCAAGGAACACCAAATACAAGCTGAAAAAGCTGCTGAGAAGGCCAAGTTGAAA
ACCAAGCCCATTGAAGAAATTCTTGCTTAA

Peptide Sequence

PEP ID

XP_016445709.1
PEP Infomation

PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Nicotiana tabacum]
Sequence

MAPSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSDEIPIISLKGIDDESGINGKRGEIC
EKIVKACEDWGIFQVVDHGVDAQLISQMTTLAKQFFALPPEEKLRFDMSGGKKGGFIVSS
HLQGEVVQDWREIVTYFSYPIRARDYSRWPDKPDGWIGVTQKYSEKLMELACKLLEVLSE
AMGLEKEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT
KDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPE
AIVYPLKIREGEKAVMDEPITFAEMYRRKMSKDLELARLKKLAKEHQIQAEKAAEKAKLK
TKPIEEILA

Transcript Sequence

Gene sequence data has not been registered.